Lab Final Paper 23 (2)Lab Final Paper 23 (2)CriteriaRatingsPtsThis criterion is linked to a Learning OutcomeTitle PageFormatted correctly with all required contents.3 to >2.0 ptsProficient2 to >0.0 ptsNeeds ImprovementNeeds careful review of required contents. Some contents missing or formatting issues0 ptsUnsatisfactoryTitle page missing3 pts
This criterion is linked to a Learning OutcomeTitleConcisely explains major theme of the project. Title is original.3 to >2.0 ptsProficient2 to >0.0 ptsNeeds ImprovementNeeds careful review of category statement. Some contents missing or needs improvement of how it is stated.0 ptsUnsatisfactoryTitle missing3 pts
This criterion is linked to a Learning OutcomeAbstractOne paragraph. No more than 250 words.
Concisely states the objectives, methods, results and conclusions.10 to >7.0 ptsProficient7 to >0.0 ptsNeeds improvementNeeds careful review of category statement. Some contents missing or needs improvement of how it is stated.0 ptsUnsatisfactoryAbstract missing10 pts
This criterion is linked to a Learning OutcomeIntroductionThree paragraphs.

1. General background information about the topic that links to the specific objective(s) of the experiment. Citations in APA format.

2. Specific information about the enzyme tested.
Accurately presents the specific objective(s) of the experiment. Provides a very brief summary of the methods(s) used. Citations in APA format.

3. States null and alternative hypotheses. States a specific prediction for each plant tested.15 to >13.0 ptsProficient13 to >0.0 ptsNeeds ImprovementNeeds careful review of category statement. Some contents missing or needs improvement of how it is stated.0 ptsUnsatisfactoryIntroduction missing15 pts
This criterion is linked to a Learning OutcomeMaterials and MethodsGives enough details to allow for replication of each required protocol. Clearly states the positive control and experimental groups for each plant tested. Clearly states results of standardization experiments and any adjustments to mixing tables.

Links the four parts of the experiment so that the reader can see the purpose of each.

Correct use of citations in APA format.

Effectively organizes this section with subheadings for each protocol.15 to >13.0 ptsProficient13 to >0.0 ptsNeeds ImprovementNeeds careful review of category statement. Some contents missing or needs improvement of how it is stated.0 ptsUnsatisfactoryMaterials and Methods missing15 pts
This criterion is linked to a Learning OutcomeResultsAll required graphs are presented.
Microsoft Excel is used to create graphs
Each graph opens with a quantitative summary of major trends.
Each graph has all required components.
Graphs are presented in the same order as the protocols in the Materials and Methods section.
Appendix section placed after Literature Cited section
All tables of raw data are presented in the same order as the graphs and have all required components.25 to >20.0 ptsProficient20 to >0.0 ptsNeeds ImprovementNeeds careful review of category statement. Some contents missing or needs improvement of how it is stated or presented.0 ptsUnsatisfactoryResults and Appendix sections missing25 pts
This criterion is linked to a Learning OutcomeDiscussionTwo paragraphs

Interprets results. Supports conclusions using quantitative results as evidence. Relates quantitative results to structural changes to peroxidase. Citations in APA format.

Compares results to hypotheses stated in the Introduction. States whether hypotheses were accepted or rejected and why. Compares results to findings of other scientists (primary sources).15 to >13.0 ptsProficient13 to >0.0 ptsNeeds ImprovementNeeds careful review of category statement. Some contents missing or needs improvement of how it is stated.0 ptsUnsatisfactoryDiscussion missing15 pts
This criterion is linked to a Learning OutcomeLiterature CitedCitations follow APA format and are cited in the body of the paper. Required number of primary and tertiary sources.4 to >2.0 ptsProficient2 to >0.0 ptsNeeds ImprovementNeeds careful review of category statement. Some sources missing . Formatting issues.0 ptsUnsatisfactoryNo citations provided4 pts
This criterion is linked to a Learning OutcomeGeneralPaper is written in scientific style, direct and to the point. Chemical formulas accurate and formatted correctly.
Spelling and grammar are correct.
Sentence structure is accurate.
Correct use of active and passive voice.10 to >7.0 ptsProficient7 to >0.0 ptsNeeds ImprovementNeeds careful review of category statement. Some contents missing or needs improvement of how it is stated.0 ptsUnsatisfactoryNo paper submitted10 pts
Total Points: 100Previous

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Cabbage and Purple Turnip Peroxidase Study

Abstract

This study explores the properties and potential applications of peroxidase enzymes extracted from cabbage (Brassica oleracea capitata L.) and purple turnip (Brassica rapa subsp. rapa) for industrial and environmental use, particularly in wastewater treatment. Peroxidase enzymes were isolated and partially purified from both vegetables and assessed under various pH and temperature conditions. Cabbage peroxidase showed optimal activity at pH 5.5 and 30 °C, retaining 41% activity at 80 °C, while purple turnip peroxidase had optimal activity at pH 5.0 and 35 °C, maintaining stability up to 80 °C. Both enzymes demonstrate potential for large-scale applications in bioremediation, offering stability and efficiency for the degradation of phenolic pollutants and azo dyes in wastewater.

Introduction

Peroxidase enzymes, which use hydrogen peroxide as a substrate to oxidize a variety of molecules, are vital for both biological and industrial applications. These enzymes are especially valuable for environmental bioremediation, as they can reduce the toxicity of pollutants like phenols and synthetic dyes. The stability and activity of peroxidase enzymes are influenced by environmental factors such as pH and temperature, which vary based on enzyme origin. This study evaluates peroxidase enzymes extracted from cabbage and purple turnip, aiming to compare their stability and effectiveness in potential industrial applications, especially for the treatment of wastewater.

Materials and Methods

1. Extraction of Peroxidase Cabbage Peroxidase: Peroxidase was extracted from 50g of cabbage leaves homogenized in 200 ml of 0.1 M Tris-HCl buffer at pH 7.5. After blending, the mixture was filtered and centrifuged at 10,000 rpm for 15 minutes at 4 °C, yielding a crude enzyme extract. Purple Turnip Peroxidase: Similarly, peroxidase was extracted from 50g of purple turnip, blended in 200 ml of the same buffer and centrifuged under identical conditions to obtain a crude enzyme extract.

2. Partial Purification of Peroxidase For both cabbage and purple turnip, ammonium sulfate precipitation (75% for cabbage and 70% for turnip) was used to isolate the enzyme. The precipitate was dissolved in Tris-HCl buffer and dialyzed overnight to remove excess salts. Further purification was achieved using gel filtration chromatography on a Sephadex G-75 column, separating peroxidase from other proteins and impurities.

3. Determination of Peroxidase Activity Peroxidase activity was measured by monitoring the oxidation of ABTS in the presence of hydrogen peroxide. Absorbance was recorded at 416 nm to track the reaction rate.

This method was used to compare enzyme activity rates across pH and temperature variations.

4. Thermal and pH Stability Thermal stability was tested for both enzymes by incubating samples at 50 °C, 60 °C, 70 °C, and 80 °C for one hour, followed by spectrophotometric analysis of residual activity. pH stability was assessed by incubating the enzymes in buffers from pH 3.0 to 9.0 and measuring residual activity after 24 hours.

Results

1. Cabbage Peroxidase Cabbage peroxidase exhibited maximum activity at pH 5.5 and 30 °C, and maintained 41% activity even at 80 °C. This enzyme showed high potential for wastewater treatment due to its effectiveness in removing phenolic compounds and azo dyes, making it suitable for bioremediation applications.

2. Purple Turnip Peroxidase Purple turnip peroxidase demonstrated optimal activity at pH 5.0 and 35 °C. It retained significant stability at elevated temperatures, maintaining activity up to 80 °C. This enzyme’s characteristics align well with industrial applications requiring efficient degradation of organic pollutants.

Discussion

Both cabbage and purple turnip peroxidase enzymes display substantial stability and activity under conditions relevant to wastewater treatment. Cabbage peroxidase performs best at slightly lower temperatures than turnip peroxidase, which may influence specific applications depending on environmental conditions. Both enzymes exhibit resilience to adverse conditions, supporting their potential use in large-scale bioremediation. Their stability and ability to degrade hazardous compounds such as phenols and synthetic dyes make them effective tools for improving water quality.

Conclusion

This combined study highlights the efficacy of peroxidase enzymes from cabbage and purple turnip for environmental applications. Both enzymes exhibit strong activity and stability under variable pH and temperature conditions, suggesting their utility in industrial and environmental cleanup processes. Further research could explore scaling these findings to implement enzyme-based bioremediation on a broader scale, potentially providing a sustainable solution to water pollution challenges.

This combined study provides a clear side-by-side analysis of cabbage and purple turnip peroxidases, emphasizing their similarities and differences while presenting their potential applications in wastewater treatment. Let me know if you'd like more details on any specific section!

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Cabbage Peroxide Study

Nesna Prasai

Biology 1406

Professor’s Name- Katherine Hoffman

11/03/2024

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Cabbage Peroxide Study

Abstract

The main aim of this study was to determine the performance of the peroxidase enzyme

isolated from cabbage (Brassica oleracea capitata L.) and examine its usability in specific

industrial and environmental uses. This study explores the properties and potential applications

of peroxidase enzymes extracted from cabbage (Brassica oleracea capitata L.) and purple turnip

(Brassica rapa subsp. rapa) for industrial and environmental use, particularly in wastewater

treatment. Heterogeneous peroxidase are multi-functional enzymes that effectively remove

various pollutants; thus, they apply to wastewater treatment. In this study, peroxidase was

solubilized through homogenate and centrifugation methods and determination of the efficiency

of peroxidase under differential pH and temperature profiles. It had the best pH optima of 5.5

and the best temperature optima of 30 °C; it has pretty constant activity within the pH range of

4.0 – 7.0 and retained 41% activity at 80°C. While purple turnip peroxidase exhibited best

activity at pH 5.0 and 35 °C, maintaining stability up to 80 °C, cabbage peroxidase demonstrated

optimal activity at pH 5.5 and 30 °C, sustaining 41% activity at 80 °C. Both enzymes show

promise for widespread use in bioremediation, providing stability and effectiveness for the

breakdown of azo dyes and phenolic contaminants in wastewater.From these findings, it can be

postulated that cabbage peroxidase is a stable enzyme that could be used to degrade phenolic

compounds and azo dyes in the wastewater management program. Due to its stability and

effectiveness, cabbage peroxidase can be used on a large scale to solve various environmental

problems.

Introduction

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Peroxidase are one of the classes of enzymes with hydrogen peroxide as a substrate

through which they oxidize other substrates and are active participants in several biological and

industrial processes. Enzymes called peroxidase, which oxidize different compounds using

hydrogen peroxide, are crucial for both commercial and biological uses, including environmental

bioremediation. They aid in the reduction of contaminants such as dyes and phenols. The

stability and efficacy of purple turnip and cabbage peroxidase for possible wastewater treatment

applications are compared in this study.

These enzymes are broadly applied for the bioremediation of pollutants such as phenols

and synthetic dyes because of their capacity to reduce the toxicity of various hazardous

substances. Environmental factors such as pH and temperature affect the stability and

effectiveness of peroxidase activity. Effectively, these enzymes demonstrate their highest activity

only under a particular range of pH and temperature that depends on the origin of the peroxidase.

The peroxidase used in this study was obtained from extracts of cabbage leaves, and

cabbage is known to be a suitable source of this enzyme, primarily from waste cabbage. The

cabbage peroxidase has been substantiated as a capable enzyme that degrades the phenolic

pollutants and azo dyes in the wastewater, eradicating water pollution most efficiently. This

experiment was carried out to evaluate both the pH and thermal stability of cabbage peroxidase

for applicability in industries and environmental stability. Ammonium sulfate precipitation,

dialysis, and gel filtration chromatography were used in the partially purified enzyme

preparation. The amount of enzyme activity under various conditions was measured using

spectrophotometric methods.

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The null hypothesis (Ho) assumed that pH level does not affect the activity and stability

of the cabbage peroxidase. On the other hand, the alternate hypothesis (Ha) was postulated,

assuming that pH level influences the enzyme's activity. To this effect, the experiment aimed to

determine the conditions that lead to efficient activity and stability of cabbage peroxidase to aid

in processes such as wastewater treatment.

Materials and Methods

Extraction of Peroxidase

Cabbage leaf waste peroxidase was isolated from decoction made from 50g waste

cabbage leaves homogenized in 200 ml 0.1 M Tris-HCl buffer, pH 7.5 for 10 min. Purple Turnip

Peroxidase: Similarly, peroxidase was extracted from 50g of purple turnip, blended in 200 ml of

the same buffer and centrifuged under identical conditions to obtain a crude enzyme extract.

A two-layer cheesecloth layer was used to filter out the solid content of the homogenate

from the blended sample. After filtration, the solution was centrifuged for 15 minutes at 10,000

revolutions per minute at a temperature of four degrees Celsius to precipitate the solid particles.

The peroxidase enzyme used in the analysis was collected as a crude enzyme extract, forming the

clear supernatant solution at the upper layer of the centrifuge tube.

Partial Purification of Peroxidase

The crude cabbage peroxidase extract was subjected to ammonium sulfate precipitation at

75% to precipitate the protein. The mixture was then stirred for 4 hours to ensure a completed

precipitate precipitation. The precipitate formed was then sedimented by centrifugation, and the

pellet thus formed was taken up in Tris-HCl buffer for subsequent use. The dissolved enzyme

solution was subjected to dialysis for 12 hours against the same buffer to remove excess salts. To

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further purify the enzyme, the dialyzed solution was centrifuged and loaded into Sephadex G-75

gel filtration column chromatography, which allowed for the separation of the peroxidase from

other proteins and impurities.

Determination of Peroxidase Activity

Peroxidase activity was determined using three mM ABTS dissolved in 3% hydrogen

peroxide. To study the reaction kinetics, the increase of the ABTS absorbance at 416 nm was

recorded using the UV-Vis spectrophotometer due to the colored product formed upon oxidation

of ABTS. The change in absorbance over time was measured; from this, the enzyme's activity

was determined as the rate of substrate oxidation per minute to deduce the enzyme's efficiency

under these conditions.

Thermal Stability

The heat stability of cabbage peroxidase was further studied by comparing the enzyme

activity of the sample when incubated at 50°C, 60 °C, 70°C and 80°C for one hour.

Subsequently, the residual activity of the enzyme was determined by spectrophotometric

analysis.

pH Stability

Peroxidase activity in response to pH change was also investigated by incubating the

enzyme in pH 2.0 to 9.0 buffers. The residual activity was also determined after 24 hours to

check on the pH stability of the enzyme.

Results

Enzyme Activity

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The hypotheses were tested, and the outcome supported the second hypothesis and

revealed that pH influences cabbage peroxidase activity. The highest rate of enzyme activity

reached in this experiment is at about pH 5.5, similar to that of the peroxidase isolated from plant

tissues. Besides, its use in industrial wastewater is possible because cabbage peroxidase has high

efficiency in removing threatening phenolic substances and azo dyes. At the same time,

minimizing the concentration of pollutants is relevant, which will contribute to

enhancing environmental management approaches (Joel et al., 2020).

Substrate Specificity

Thus, The kinetic analysis depicted the enzyme's ability, affinity, and various substrates.

This observation reveals that when used in the analysis of cabbage peroxidase, ABTS was the

most favored substrate over the preferred other substrates like guaiacol and o-dianisidine. The

kinetic data derived from the experiment also enhances the idea of the specific substrate affinity

of the enzyme ABTS, which had a V max of 1111.11 mM/min. This situation was in contrast to

the data obtained for enzyme-substrate reactions where the Michaelis constant (Km) was equal to

1.24 mM, which indicated that the enzyme rapidly reacted with this substrate.

Effect of Metal Ions

The activity of cabbage peroxidase rose slightly in the presence of metal ions Mn²⁺ and

Zn²⁺ ; therefore, it is evident that both Mn²⁺ and Zn²⁺ benefit the enzyme activity. These metal

toxic effects were shown where Hg², Cu²⁺, and Ni²⁺ ions inhibited the enzyme activity.

Moreover, the case of peroxidase activity proved the influence that some definite metal ions and

chemical reagents exert on enzyme activity and productivity parameters.

Discussion

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This study shows that cabbage peroxidase has moderate stability at pH 4.0–7.0 and at

temperatures up to 80°C, maintaining relatively high levels of enzymatic activity. This stability

makes it favorable for industrial applications, particularly treating wastewater environments

exhibiting enzyme disturbances. Cabbage peroxidase could increase the rate of dealers of

phenols and azo dyes in water systems for enzyme optimal working pH, which was 5.5 at various

temperatures and acidic pH (Joel et al., 2020). Due to its ability to survive adverse conditions, it

is widely used for bioremediation and other environmental remediation programs, which are

cheaper and more effective than ordinary bioremediation techniques. Purple turnip and cabbage

peroxidase both exhibit high stability and activity in wastewater treatment-suitable settings.

Compared to turnip peroxidase, cabbage peroxidase performs best at somewhat lower

temperatures, which may influence application decisions. The robustness of both enzymes and

their capacity to break down contaminants like dyes and phenols demonstrate their potential for

extensive bioremediation and the enhancement of water quality.

The hypotheses were tested, and there was sufficient evidence for accepting the second

hypothesis, which means there was a significant correlation between the pH and cabbage

peroxidase activity. It was also established that the enzyme demonstrated maximal activity at pH

5.5, and the experiment results correspond to the data on plant peroxidase in the literature

sources, which also exhibit the highest activity with this pH value. Furthermore, the results

demonstrating that cabbage peroxidase can degrade phenolic compounds and azo dyes proven in

the present work imply the enzyme in the subsequent treatment of industrial water effluents. The

peroxidase of purple turnip and cabbage are clearly compared in this combined study,

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highlighting their differences and similarities as well as their uses in wastewater treatment. If you

would want further information on any particular subject, please let me know!

Because this enzyme can handle dangerous pollutants, it can be a probable path to

reducing the levels of pollutants in effluents from industries, thereby enhancing water stream

sustainability and effectively implementing proper environmental management measures.

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Reference

Joel, E. B., Mafulul, S. G., Adamu, H. E., Goje, L. J., Tijjani, H., Igunnu, A., & Malomo, S. O.

(2020). Peroxidase from waste cabbage (Brassica oleracea capitata L.) exhibits the

potential to biodegrade phenol and synthetic dyes from wastewater. Scientific African, 10,

e00608.